New therapeutic targets in the outer membrane of the bacteria associated with healthcare-related infections, through the study of host-pathogen interactions in vitro and in animal models.
Our group previously studied the host response to bacterial infections, deciphering the molecular and cellular mechanisms involved in host cell death caused by GNB such as Acinetobacter baumannii. We have characterized for the first time a signaling pathway located in the membrane and cytosol of host cells, such as human lung epithelial cells, that regulates the adhesion and invasion of A. baumannii in host cells. We have identified the relationship between the phosphorylcholine (ChoP) present in the outer membrane of this pathogen, the platelet activating factor receptor (PAFR) present in the human lung epithelial cells, and the adherence and entry of A. baumannii in these host cells, as a mechanism for colonization and infection by A. baumannii.
Following this work, we have studied whether the outer membrane of A. baumannii harbors other adhesins involved in its adherence and invasion in the host. Three adhesins (OmpA, Omp33 and TonB) present in the outer membrane protein of A. baumannii were identified to bind to fibronectin, an extracellular matrix protein present in the host, which will allow the development of possible therapeutic approaches in the future to stop the entry of A. baumannii into the host and its escape from the immune system response.
Among these three adhesins, we have worked deeply with OmpA, characterizing its gene regulation and role in the pathogenesis of GNB, with the objective to develop and evaluate the therapeutic efficacy of OmpA inhibitors and their derivatives to inhibit the infections caused by OmpA expressing GNB. Moreover, we aimed to decipher how GNB respond to host signals, and which mechanisms used GNB to enter and persist inside host cells. To this end, we studied, using cellular and molecular techniques, the role of endosomes/lysosomes in the intracellular traffic of GNB, in particular A. baumannii. First data showed that the transcription factor EB (TFEB), well-known as inducer of the biogenesis of endosomes/lysosomes genes, participated in the entrance and persistence of A. baumannii inside human lung epithelial cells.
Selected publications on this topic
- Parra-Millán R, Guerrero-Gómez D, Ayerbe-Algaba R, Pachón-Ibáñez ME, Miranda-Vizuete A, Pachón J, Smani Y. Intracellular Trafficking and Persistence of Acinetobacter baumannii Requires Transcription Factor EB. mSphere. 2018 Mar 28;3(2):e00106-18.
- Sánchez-Encinales V, Álvarez-Marín R, Pachón-Ibáñez ME, Fernández-Cuenca F, Pascual A, Garnacho-Montero J, Martínez-Martínez L, Vila J, Tomás MM, Cisneros JM, Bou G, Rodríguez-Baño J, Pachón J, Smani Y. Overproduction of Outer Membrane Protein A by Acinetobacter baumannii as a Risk Factor for Nosocomial Pneumonia, Bacteremia, and Mortality Rate Increase. J Infect Dis. 2017 Mar 15;215(6):966-974.
- Smani Y, Docobo-Pérez F, López-Rojas R, Domínguez-Herrera J, Ibáñez-Martínez J, Pachón J. Platelet-activating factor receptor initiates contact of Acinetobacter baumannii expressing phosphorylcholine with host cells.J Biol Chem. 2012 Aug 3;287(32):26901-10.
- Smani Y, McConnell MJ, Pachón J. Role of fibronectin in the adhesion of Acinetobacter baumannii to host cells. PLoS One. 2012;7(4):e33073.
- Smani Y, Dominguez-Herrera J, Pachón J. Association of the outer membrane protein Omp33 with fitness and virulence of Acinetobacter baumannii. J Infect Dis. 2013 Nov 15;208(10):1561-70.
New antimicrobial resistance mechanisms.
We are also interested in deciphering new antimicrobial resistance mechanisms. We identified a new concept called ESRI (Extended Spectrum Resistance to β-lactams/β-lactamases inhibitors [BL/BLI]) in E. coli through the activation of TEM. Consequently we developed new systems to detect rapidly isolates of E. coli resistant to BL/BLI inhibitors and that develop ESRI such ESRI test (a colorimetric test) and MALDIpiptaz test (based to MALDI-TOF spectrum). Currently, we are validating these tests against a collection of clinical isolates of E. coli.
Selected publications on this topic
- Rodríguez-Villodres A, Gálvez-Benítez L, Arroyo MJ, Méndez G, Mancera L, Vila-Domínguez A, Lepe JA, Smani Y*. Ultrasensitive and rapid identification of ESRI developer- and piperacillin/tazobactam-resistant Escherichia coli by the MALDIpiptaz test. Emerging Microbes & Infections. Aceptado. DOI:10.1080/22221751.2022.2113746
- Rodríguez-Villodres Á, Gutiérrez Linares A, Gálvez-Benitez L, Pachón J, Lepe JA, Smani Y. Semirapid Detection of Piperacillin/Tazobactam Resistance and Extended-Spectrum Resistance to β-Lactams/β-Lactamase Inhibitors in Clinical Isolates of Escherichia coli. Microbiol Spectr. 2021 Oct 31;9(2):e0080121.
- Rodríguez-Villodres Á, Gil-Marqués ML, Álvarez-Marín R, Bonnin RA, Pachón-Ibáñez ME, Aguilar-Guisado M, Naas T, Aznar J, Pachón J, Lepe JA, Smani Y. Extended-spectrum resistance to β-lactams/β-lactamase inhibitors (ESRI) evolved from low-level resistant Escherichia coli. J Antimicrob Chemother. 2020 Jan 1;75(1):77-85.
Non-antimicrobial approaches in the treatment of multidrug-resistant Gram-negative bacilli.
In 2016 we have registered the intellectual property of OmpA inhibitor, AOA-2, and its derivatives that showed therapeutic efficacy in monotherapy and in combination with antibiotics in murine model of infection by GNB such as
A. baumannii, Pseudomonas aeruginosa and E. coli [Ref.PCT/EP2015/072166]. This innovation was developed in collaboration with Dr. Ernest Giralt (Instituto de Investigación Biomédica, IRB de Barcelona). Thanks to the promising results, we co-founded DrugID Biotech to develop new anti-infectious agents.
In the same way, we have evaluated another therapeutic approach based on the stimulation of the immune system by lysophosphatidylcholine. The obtained results, that showed preclinical efficacy in animal models, were registered as a patent [Ref. P201331715] and published, and opened the possibility of using lysophosphatidylcholine as an adjunctive antimicrobial treatment.
Similarly, we have demonstrated that tamoxifen, an anticancer agent that antagonize the oestrogen receptor, is able to modulate the immune response and to reduce the hyperinflammation in mice caused by the bacterial sepsis
On the other hand, we have assessed other therapeutic approaches based on repurposing drugs. Among them, we assessed the antibacterial effect of rafoxanide, oxyclozanide and niclosamide, anthelmintic drugs that showed synergy
with colistin in vitro and in animal models of infection In addition, we assessed the antibacterial effect of tamoxifen metabolites against Gram-negative and Gram-positive bacteria.
Selected publications on this topic
- Miró-Canturri A, Vila-Domínguez A, Caretero-Ledesma M, Ayerbe-Algaba R, Pachón J, Jiménez-Mejías ME, Smani Y. Repurposing of the Tamoxifen Metabolites to Treat Methicillin-Resistant Staphylococcus epidermidis and Vancomycin-Resistant Enterococcus faecalis Infections. Microbiol Spectr. 2021 Oct 31;9(2):e0040321.
- Miró-Canturri A, Ayerbe-Algaba R, Villodres ÁR, Pachón J, Smani Y. Repositioning rafoxanide to treat Gram-negative bacilli infections. J Antimicrob Chemother. 2020 Jul 1;75(7):1895-1905.
- Parra-Millán R, Vila-Farrés X, Ayerbe-Algaba R, Varese M, Sánchez-Encinales V, Bayó N, Pachón-Ibáñez ME, Teixidó M, Vila J, Pachón J, Giralt E, Smani Y. Synergistic activity of an OmpA inhibitor and colistin against colistin-resistant Acinetobacter baumannii: mechanistic analysis and in vivo efficacy. J Antimicrob Chemother. 2018 Dec 1;73(12):3405-3412.
- Vila-Farrés X, Parra-Millán R, Sánchez-Encinales V, Varese M, Ayerbe-Algaba R, Bayó N, Guardiola S, Pachón-Ibáñez ME, Kotev M, García J, Teixidó M, Vila J, Pachón J, Giralt E, Smani Y. Combating virulence of Gram-negative bacilli by OmpA inhibition. Sci Rep. 2017 Oct 31;7(1):14683.
- Parra Millán R, Jiménez Mejías ME, Sánchez Encinales V, Ayerbe Algaba R, Gutiérrez Valencia A, Pachón Ibáñez ME, Díaz C, Pérez Del Palacio J, López Cortés LF, Pachón J, Smani Y. Efficacy of Lysophosphatidylcholine in Combination with Antimicrobial Agents against Acinetobacter baumannii in Experimental Murine Peritoneal Sepsis and Pneumonia Models. Antimicrob Agents Chemother. 2016 Jul 22;60(8):4464-70.